2006 YAMAHA FJR1300AS AUX

TABLE OF CONTENTSSAFETY INFORMATION ..................1-1
DESCRIPTION ..................................2-1
Left view ..........................................2-1
Right view ........................................2-2
Controls and instruments.................2-3
INSTRUMENT AND CONTROL
FUNCTIONS.......................................3-1
YCC-S system ................................3-1
Immobilizer system .........................3-1
Main switch/steering lock ................3-2
Indicator and warning lights ............3-4
Speedometer ..................................3-7
Tachometer ....................................3-7
Multi-function display ......................3-7
Anti-theft alarm (optional) .............3-14
Handlebar switches ......................3-15
Shift pedal .....................................3-17
Hand shift lever .............................3-17
Brake lever ...................................3-18
Brake pedal ..................................3-18
ABS ..............................................3-18
Fuel tank cap ................................3-19
Fuel ...............................................3-20
Fuel tank breather/overflow
hose ..........................................3-21
Catalytic converter ........................3-21
Seats ............................................3-21
Adjusting the rider seat height ......3-23
Storage compartment ...................3-25Accessory box .............................. 3-25
Adjusting the headlight beams ..... 3-26
Handlebar position ....................... 3-26
Opening and closing the
cowlings .................................... 3-27
Rear view mirrors ......................... 3-28
Adjusting the front fork ................. 3-28
Adjusting the shock absorber
assembly ................................... 3-30
Grip warmer adjusting knob ......... 3-31
Sidestand ..................................... 3-32
Ignition circuit cut-off system ........ 3-32
Auxiliary DC jack .......................... 3-34
PRE-OPERATION CHECKS............. 4-1
Pre-operation check list .................. 4-2
OPERATION AND IMPORTANT
RIDING POINTS................................. 5-1
Starting the engine ......................... 5-1
Shifting ........................................... 5-2
Tips for reducing fuel
consumption ............................... 5-3
Engine break-in .............................. 5-3
Parking ........................................... 5-4
PERIODIC MAINTENANCE AND
MINOR REPAIR................................. 6-1
Owner’s tool kit ............................... 6-1
Periodic maintenance and
lubrication chart .......................... 6-2Removing and installing panels ..... 6-5
Checking the spark plugs .............. 6-7
Engine oil and oil filter cartridge ..... 6-8
Final gear oil ................................ 6-10
Coolant ........................................ 6-12
Air filter element ........................... 6-13
Checking the engine idling
speed ........................................ 6-14
Checking the throttle cable
free play .................................... 6-14
Valve clearance ........................... 6-14
Tires ............................................. 6-15
Cast wheels ................................. 6-17
YCC-S clutch ............................... 6-18
Adjusting the rear brake light
switch ....................................... 6-18
Checking the front and rear brake
pads .......................................... 6-18
Checking the brake and
YCC-S clutch fluid levels .......... 6-19
Changing the brake and
YCC-S clutch fluids .................. 6-20
Checking and lubricating the
cables ....................................... 6-21
Checking and lubricating the
throttle grip and cable ............... 6-21
Checking and lubricating the
brake and shift pedals .............. 6-21
Checking and lubricating the
brake lever ................................ 6-22U2D2EAE0.book Page 1 Monday, June 26, 2006 2:55 PM

TABLE OF CONTENTS
Checking and lubricating the
centerstand and sidestand ........ 6-22
Lubricating the swingarm pivots ... 6-23
Lubricating the rear suspension ... 6-23
Checking the front fork ................. 6-23
Checking the steering ................... 6-24
Checking the wheel bearings ....... 6-25
Battery .......................................... 6-25
Replacing the fuses ...................... 6-26
Headlight bulb .............................. 6-28
Front turn signal light .................... 6-28
Replacing a rear turn signal light
bulb or a tail/brake light bulb ..... 6-28
Replacing the license plate light
bulb ........................................... 6-29
Auxiliary light bulb ........................ 6-30
Troubleshooting ............................ 6-30
Troubleshooting charts ................. 6-31
MOTORCYCLE CARE AND
STORAGE.......................................... 7-1
Care ................................................ 7-1
Storage ...........................................7-3
SPECIFICATIONS ............................. 8-1
CONSUMER INFORMATION............. 9-1
Identification numbers .................... 9-1
U2D2EAE0.book Page 2 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-3
3
EAU26811
ON
All electrical circuits are supplied with
power; the meter lighting, taillights, li-
cense plate light and auxiliary lights
come on, and the engine can be start-
ed. The key cannot be removed.NOTE:The headlights come on automatically
when the engine is started and stay onuntil the key is turned to “OFF”.
EAU10660
OFF
All electrical systems are off. The key
can be removed.
EAU10690
LOCK
The steering is locked, and all electrical
systems are off. The key can be re-
moved.To lock the steering
1. Turn the handlebars all the way to
the left or right.
2. Push the key in from the “OFF” po-
sition, and then turn it to “LOCK”
while still pushing it.
3. Remove the key.To unlock the steering
Push the key into the main switch, and
then turn it to “OFF” while still pushing
it.
WARNING
EWA10060
Never turn the key to “OFF” or
“LOCK” while the vehicle is moving,
otherwise the electrical systems will
be switched off, which may result in
loss of control or an accident. Make
sure that the vehicle is stopped be-
fore turning the key to “OFF” or“LOCK”.
1. Push.
2. Turn.
1. Push.
2. Turn.
U2D2EAE0.book Page 3 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-4
3
EAU39460
(Parking)
The steering is locked, and the tail-
lights, license plate light and auxiliary
lights are on. The hazard lights and turn
signal lights can be turned on, but all
other electrical systems are off. The
key can be removed.
The steering must be locked before the
key can be turned to “”.
CAUTION:
ECA11020
Do not use the parking position for
an extended length of time, other-wise the battery may discharge.
EAU11003
Indicator and warning lights
EAU11030
Turn signal indicator lights “” and
“”
The corresponding indicator light flash-
es when the turn signal switch is
pushed to the left or right.
EAU11060
Neutral indicator light “”
This indicator light comes on when the
transmission is in the neutral position.
EAU11080
High beam indicator light “”
This indicator light comes on when the
high beam of the headlight is switched
on.
EAU11120
Oil level warning light “”
This warning light comes on when the
engine oil level is low.
The electrical circuit of the warning light
can be checked by turning the key to
“ON”.
If the warning light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-
cuit.NOTE:Even if the oil level is sufficient, the
warning light may flicker when riding on
a slope or during sudden acceleration
or deceleration, but this is not a mal-function.
1. Left turn signal indicator light “”
2. Right turn signal indicator light “”
3. Engine trouble “”/YCC-S “” indi-
cators and warning light
4. Anti-lock Brake System (ABS) warning light
“”
5. Neutral indicator light “”
6. High beam indicator light “”
7. Oil level warning light “”
8. Immobilizer system indicator light
SHIFT
ABS
U2D2EAE0.book Page 4 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-34
3
EAU39651
Auxiliary DC jack This vehicle is equipped with an auxilia-
ry DC jack in the accessory box.
A 12-V accessory connected to the
auxiliary jack can be used when the key
is in the “ON” position and should only
be used when the engine is running.CAUTION:
ECA15430
The accessory connected to the
auxiliary DC jack should not be used
with the engine turned off, and the
load must never exceed 30 W (2.5 A),
otherwise the battery may dis-charge.
To use the auxiliary DC jack
1. Open the accessory box lid. (See
page 3-25.)
2. Turn the key to “OFF”.
3. Remove the auxiliary DC jack cap.4. Insert the accessory plug into the
auxiliary DC jack.
5. Turn the key to “ON”, and then
start the engine. (See page 5-1.)
WARNING
EWA14360
To prevent electrical shock or short-
circuiting, make sure that the cap is
installed when the auxiliary DC jackis not being used.
1. Auxiliary DC jack cap
1. Auxiliary DC jack
U2D2EAE0.book Page 34 Monday, June 26, 2006 2:55 PM

PERIODIC MAINTENANCE AND MINOR REPAIR
6-27
6
If a fuse is blown, replace it as follows.
1. Turn the key to “OFF” and turn off
the electrical circuit in question.
2. Remove the blown fuse, and then
install a new fuse of the specified
amperage.
CAUTION:
ECA10640
Do not use a fuse of a higher amper-
age rating than recommended to
avoid causing extensive damage to
the electrical system and possibly afire.
3. Turn the key to “ON” and turn on
the electrical circuit in question to
check if the device operates.
4. If the fuse immediately blows
again, have a Yamaha dealer
check the electrical system.
1. Fuse box
2. Right radiator fan fuse
3. Left radiator fan fuse
4. Hazard fuse
5. Backup fuse (for odometer, clock and immo-
bilizer system)
6. YCC-S motor control fuse
7. Headlight fuse
8. Signaling system fuse
9. ABS control unit fuse
10.Ignition fuse
11.Fuel injection system fuse
12.Auxiliary DC jack fuse
13.Spare fuse
Specified fuses:
Main fuse:
50.0 A
Headlight fuse:
25.0 A
Signaling system fuse:
15.0 A
Ignition fuse:
10.0 A
Radiator fan fuse:
15.0 A × 2
Backup fuse:
10.0 A
Hazard fuse:
10.0 A
Fuel injection system fuse:
15.0 A
ABS control unit fuse:
10.0 A
Auxiliary DC jack fuse:
3.0 A
ABS motor fuse:
30.0 A
YCC-S motor control fuse:
30.0 A
U2D2EAE0.book Page 27 Monday, June 26, 2006 2:55 PM

PERIODIC MAINTENANCE AND MINOR REPAIR
6-30
6
EAU39020
Auxiliary light bulb If the auxiliary light does not come on,
have a Yamaha dealer check the elec-
trical circuit or replace the bulb.
EAU25870
Troubleshooting Although Yamaha motorcycles receive
a thorough inspection before shipment
from the factory, trouble may occur dur-
ing operation. Any problem in the fuel,
compression, or ignition systems, for
example, can cause poor starting and
loss of power.
The following troubleshooting charts
represent quick and easy procedures
for checking these vital systems your-
self. However, should your motorcycle
require any repair, take it to a Yamaha
dealer, whose skilled technicians have
the necessary tools, experience, and
know-how to service the motorcycle
properly.
Use only genuine Yamaha replace-
ment parts. Imitation parts may look like
Yamaha parts, but they are often inferi-
or, have a shorter service life and can
lead to expensive repair bills.
U2D2EAE0.book Page 30 Monday, June 26, 2006 2:55 PM

SPECIFICATIONS
8-3
8
Headlight:Bulb type:
Halogen bulbBulb voltage, wattage × quantity:Headlight:
12 V, 60 W/55.0 W × 2
Tail/brake light:
12 V, 5.0 W/21.0 W × 2
Front turn signal light:
12 V, 21.0 W × 2
Rear turn signal light:
12 V, 21.0 W × 2
Auxiliary light:
12 V, 5.0 W × 2
License plate light:
12 V, 5.0 W × 1
Meter lighting:
LED
Neutral indicator light:
LED
High beam indicator light:
LED
Oil level warning light:
LED
Turn signal indicator light:
LED
Engine trouble warning light:
LED
ABS warning light:
LED
Immobilizer system indicator light:
LED
Fuses:Main fuse:
50.0 A
Headlight fuse:
25.0 A
Signaling system fuse:
15.0 A
Ignition fuse:
10.0 A
Radiator fan fuse:
15.0 A × 2
Hazard fuse:
10.0 A
Fuel injection system fuse:
15.0 A
ABS control unit fuse:
10.0 A
ABS motor fuse:
30.0 A
Auxiliary DC jack fuse:
3.0 A
YCC-S motor control fuse:
30.0 A
Backup fuse:
10.0 A
U2D2EAE0.book Page 3 Monday, June 26, 2006 2:55 PM