2018 YAMAHA FJR1300AE immobilizer

EAU81560
Read this manual carefully before operatin g this vehicle. This manual
shoul d stay with this vehicle if it is sol d.
EAU81570
Declaration of Conformity:
Hereby, YAMAHA MOTOR ELECTRONICS Co., Ltd declares that the radio equip-
ment type, IMMOBILIZER, 1MC-00 is in compliance with Directive 2014/53/EU.
The full text of the EU declaration of conformity is available at the following inter-
net address:
https://global.yamaha-motor.com/eu_doc/
Frequency band: 134.2 kHz
The maximum radio frequency power: 49.0 [dBμV/m]
Manufacturer:
YAMAHA MOTOR ELECTRONICS Co., Ltd 1450-6 Mori, Mori-machi, Shuchi-Gun, Shizuoka, 437-0292 Japan
Importer:
YAMAHA MOTOR EUROPE N.V. Koolhovenlaan 101, 1119 NC Schiphol-Rijk, 1117 ZN, Schiphol, the Netherlands
UB96E1E0.book Page 1 Monday, July 10, 2017 10:57 AM

Table of contents
Safety information ............................1-1
Description ........................................2-1
Left view ..........................................2-1
Right view........................................2-2
Controls and instruments ................2-3
Instrument an d control functions ....3-1
Immobilizer system .........................3-1
Main switch/steering lock ...............3-2
Indicator lights and warning lights ............................................3-4
Cruise control system .....................3-6
Multi-function meter unit .................3-9
D-mode (drive mode) ....................3-22
Handlebar switches.......................3-22
Clutch lever ...................................3-24
Shift pedal .....................................3-24
Brake lever ....................................3-25
Brake pedal ...................................3-25
ABS ...............................................3-26
Traction control system.................3-27
Fuel tank cap.................................3-28
Fuel................................................3-29
Fuel tank overflow hose ................3-30
Catalytic converters .....................3-31
Seats .............................................3-31
Adjusting the rider seat height ......3-33
Storage compartments .................3-35
Accessory box...............................3-36
Adjusting the headlight beams......3-37
Handlebar position ........................3-37
Opening and closing the cowling vents ..........................................3-38
Rear view mirrors ..........................3-39
Adjusting the front and rear
suspension.................................3-40
Sidestand ......................................3-44
Ignition circuit cut-off system........3-45
Auxiliary DC jack ..........................3-47
Cornering lights .............................3-48 For your safety – pre-operation
checks
............................................... 4-1
Operation an d important ri din g
points ................................................. 5-1
Starting the engine.......................... 5-2
Shifting ............................................ 5-3
Tips for reducing fuel consumption................................ 5-4
Engine break-in ............................... 5-5
Parking ............................................ 5-6
Perio dic maintenance an d
a d justment ........................................ 6-1
Owner’s tool kit ............................... 6-2
Periodic maintenance chart for the emission control system.............. 6-3
General maintenance and lubrication chart........................... 6-4
Removing and installing panels ...... 6-7
Checking the spark plugs ............. 6-10
Canister......................................... 6-11
Engine oil and oil filter cartridge ... 6-11
Final gear oil.................................. 6-14
Coolant ......................................... 6-16
Cleaning the air filter element ....... 6-17
Checking the engine idling
speed......................................... 6-19
Checking the throttle grip free
play ............................................ 6-19
Valve clearance ............................. 6-20
Tires .............................................. 6-20
Cast wheels .................................. 6-23
Clutch lever ................................... 6-23
Checking the brake lever free play ............................................ 6-24
Brake light switches ...................... 6-24
Checking the front and rear brake pads................................. 6-25
Checking the brake and clutch fluid levels .................................. 6-26
Changing the brake and clutch fluids .......................................... 6-27
Checking and lubricating the cables ........................................ 6-28
UB96E1E0.book Page 1 Monday, July 10, 2017 10:57 AM

Instrument and control functions
3-1
3
EAU10978
Immo bilizer system
This vehicle is equipped with an immo-
bilizer system to help prevent theft by
re-registering codes in the standard
keys. This system consists of the fol-
lowing:
 a code re-registering key (with a
red bow)
 two standard keys (with a black
bow) that can be re-registered
with new codes
 a transponder (which is installed in
the code re-registering key)
 an immobilizer unit
 an ECU
 an immobilizer system indicator
light (See page 3-5.)
The key with the red bow is used to
register codes in each standard key.
Since re-registering is a difficult pro-
cess, take the vehicle along with all
three keys to a Yamaha dealer to have
them re-registered. Do not use the key
with the red bow for driving. It should
only be used for re-registering the
standard keys. Always use a standard
key for driving.
NOTICE
ECA11822
 DO NOT LOSE THE CODE RE-
REGISTERING KEY! CONTACT
YOUR DEALER IMMEDIATELY
IF IT IS LOST! If the co de re-reg -
isterin g key is lost, reg istering
new co des in the stan dar d keys
is impossi ble. The stan dar d
keys can still be used to start
the vehicle, however if co de re-
re gisterin g is require d (i.e., if a
new stan dar d key is ma de or all
keys are lost) the entire immob i-
lizer system must be replaced .
Therefore, it is hi ghly recom-
mend ed to use either stan dar d
key an d keep the co de re-re gis-
tering key in a safe place.
 Do not su bmerse any key in wa-
ter.
 Do not expose any key to exces-
sively hig h temperatures.
 Do not place any key close to
ma gnets (this inclu des, but not
limite d to, pro ducts such as
speakers, etc.).
 Do

not place items that transmit
electrical si gnals close to any
key.
 Do not place heavy items on any
key.
 Do not g rind any key or alter its
shape.
 Do not d isassemble the plastic
part of any key.
 Do not put two keys of any im-
mo bilizer system on the same
key rin g.
1. Code re-registering key (red bow)
2. Standard keys (black bow)
UB96E1E0.book Page 1 Monday, July 10, 2017 10:57 AM

Instrument and control functions
3-4
3
EAU4939D
In dicator li ghts an d warnin g
li g hts
EAU11032Turn si gnal in dicator li ghts “ ”
an d“”
Each indicator light will flash when its
corresponding turn signal lights are
flashing.
EAU11061Neutral in dicator li ght “ ”
This indicator light comes on when the
transmission is in the neutral position.
EAU11081Hi gh beam in dicator li ght “ ”
This indicator light comes on when the
high beam of the headlight is switched
on.
EAU11124Oil level warnin g li ght “ ”
This warning light comes on if the en-
gine oil level is low.
The electrical circuit of the warning
light can be checked by turning the key
to “ON”. The warning light should
come on for a few seconds, and then
go off.
If the warning light does not come on
initially when the key is turned to “ON”,
or if the warning light remains on, have
a Yamaha dealer check the electrical
circuit.
TIP
Even if the oil level is sufficient, the
warning light may flicker when riding
on a slope or during sudden accelera-
tion or deceleration, but this is not a
malfunction.
EAU58402Cruise control in dicator li ghts “ ”
an d “SET”
These indicator lights come on when
the cruise control system is activated.
(See page 3-6.)
TIP
When the vehicle is turned on, these
lights should come on for a few sec-
onds and then go off. If the lights do
not come on, have a Yamaha dealer
check the vehicle.
EAU73171En gine trou ble warnin g lig ht “ ”
This warning light comes on if a prob-
lem is detected in the engine or other
vehicle control system. If this occurs,
have a Yamaha dealer check the on-
board diagnostic system.
1. Immobilizer system indicator light “ ”
2. Left turn signal indicator light “ ”
3. Engine trouble warning light “ ”
4. Oil level warning light “ ”
5. Neutral indicator light “ ”
6. High beam indicator light “ ”
7. Anti-lock Brake System (ABS) warning light “ ”
8. Right turn signal indicator light “ ”
9. Suspension system warning light “ ”
10.Traction control system indicator light “ ”
11.Cruise control indicator lights “ ” “SET”
GEARN25A.TEMP ˚C
LoC.TEMP˚C
0:06TIME TRIP
128374
1011
65
9
ABS
UB96E1E0.book Page 4 Monday, July 10, 2017 10:57 AM

Instrument and control functions
3-5
3
The electrical circuit of the warning
light can be checked by turning the key
to “ON”. The warning light should
come on for a few seconds, and then
go off.
If the warning light does not come on
initially when the key is turned to “ON”,
or if the warning light remains on, have
a Yamaha dealer check the vehicle.EAU69891ABS warnin
g li ght “ ”
In normal operation, this warning light
comes on when the key is turned to
“ON”, and goes off after traveling at a
speed of 10 km/h (6 mi/h) or higher.
If the ABS warning light:  does not come on when the key is
turned to “ON”
 comes on or flashes while riding
 does not go off after traveling at a
speed of 10 km/h (6 mi/h) or high-
er
The ABS may not work correctly. If any
of the above occurs, have a Yamaha
dealer check the system as soon as
possible. (See page 3-26 for an expla-
nation of the ABS.)
WARNING
EWA16041
If the ABS warnin g li ght does not go
off after travelin g at a speed of 10
km/h (6 mi/h) or hi gher, or if the
warnin g li ght comes on or flashes
while ri din g, the b rake system re-
verts to conventional brakin g. If ei-
ther of the ab ove occurs, or if the
warnin g li ght does not come on at
all, use extra caution to avoi d possi-
b le wheel lock durin g emer gency b
rakin g. Have a Yamaha d ealer
check the brake system an d electri-
cal circuits as soon as possi ble.
EAU74082Traction control system in dicator
li g ht “ ”
This indicator light will flash when trac-
tion control has engaged.
If the traction control system is turned
off, this indicator light will come on.
TIP
When the vehicle is turned on, the light
should come on for a few seconds and
then go off. If the light does not come
on, or if the light remains on, have a
Yamaha dealer check the vehicle.
EAU55393Suspension system warnin g
li g ht “ ”
This warning light comes on if a prob-
lem is detected in the electronically ad-
justable suspension system.
TIP
When the vehicle is turned on, the light
should come on for a few seconds and
then go off. If the light does not come
on, or if the light remains on, have a
Yamaha dealer check the vehicle.
EAU73120Immo bilizer system in dicator
li g ht “ ”
When the key is turned to “OFF” and
30 seconds have passed, the indicator
light will flash steadily to indicate the
immobilizer system is enabled. After 24
hours have passed, the indicator light
will stop flashing, however the immobi-
lizer system is still enabled.
ABS
UB96E1E0.book Page 5 Monday, July 10, 2017 10:57 AM

Instrument and control functions
3-6
3 The electrical circuit of the indicator
light can be checked by turning the key
to “ON”. The indicator light should
come on for a few seconds, and then
go off.
If the indicator light does not come on
initially when the key is turned to “ON”,
if the indicator light remains on, or if the
indicator light flashes in a pattern (if a
problem is detected in the immobilizer
system, the immobilizer system indica-
tor light will flash in a pattern), have a
Yamaha dealer check the vehicle.
TIP
If the immobilizer system indicator light
flashes in the pattern, slowly 5 times
then quickly 2 times, this could be
caused by transponder interference. If
this occurs, try the following.
1. Make sure there are no other im- mobilizer keys close to the main
switch. Other immobilizer system
keys may cause signal interfer-
ence and prevent the engine from
starting.
2. Use the code re-registering key to start the engine.
3. If the engine starts, turn it off, and try starting the engine with the
standard keys.
4. If one or both of the standard keys do not start the engine, take the
vehicle and all 3 keys to a Yamaha
dealer to have the standard keys
re-registered.
EAU54193
Cruise control system
This model is equipped with a cruise
control system designed to maintain a
set cruising speed.
The cruise control system operates
only when riding in 3rd gear at speeds
between about 50 km/h (31 mi/h) and
160 km/h (100 mi/h), 4th or 5th gear at
speeds between about 50 km/h (31
mi/h) and 180 km/h (112 mi/h), or 6th
gear at speeds between about 55 km/h
(34 mi/h) and 180 km/h (112 mi/h).
WARNING
EWA16341
Improper use of the cruise con-
trol system may result in loss of
control, which coul d lea d to an
acci dent. Do not activate the
cruise control system in heavy
traffic, poor weather con ditions,
or amon g win din g, slippery,
hilly, rou gh or g ravel roa ds.
 When travelin g uphill or d own-
hill, the cruise control system
may not b e able to maintain the
set cruisin g speed .
 To prevent acci dentally activat-
in g the cruise control system,
turn it off when not in use. Make
sure that the cruise control sys-
tem ind icator light “ ” is off.
UB96E1E0.book Page 6 Monday, July 10, 2017 10:57 AM

Operation and important rid ing points
5-2
5
EAU58242
Startin g the en gine
In order for the ignition circuit cut-off
system to enable starting, one of the
following conditions must be met:
 The transmission is in the neutral
position.
 The transmission is in gear with
the clutch lever pulled and the
sidestand up.
See page 3-45 for more informa-
tion.
1. Turn the key to “ON” and make sure that the start/engine stop
switch is set to “ ”.
The following warning lights and
indicator lights should come on for
a few seconds, then go off. Oil level warning light
 Engine trouble warning light
 Traction control system indi-
cator light
 Cruise control indicator lights
 Suspension sy stem warning
light
 Immobilizer system indicator
light
NOTICE
ECA11834
If a warnin g or in dicator li ght does
not come on initially when the key is
turne d to “ON”, or if a warnin g or in-
d icator li ght remains on, see pag e
3-4 for the correspon din g warnin g
an d in dicator li ght circuit check.
The ABS warning light should
come on when the key is turned to
“ON”, and then go off after travel-
ing at a speed of 10 km/h (6 mi/h)
or higher.
NOTICE
ECA17682
If the ABS warnin g li ght does not
come on an d then g o off as ex-
plained above, see pag e 3-4 for the
warnin g lig ht circuit check.
2. Shift the transmission into the
neutral position. The neutral indi-
cator light should come on. If not,
ask a Yamaha dealer to check the
electrical circuit.
3. Start the engine by pushing the “ ” side of the start/engine
stop switch.
If the engine fails to start, release
the start/engine stop switch, wait
a few seconds, and then try again.
Each starting attempt should be
as short as possible to preserve
the battery. Do not crank the en-
gine more than 10 seconds on any
one attempt.
NOTICE
ECA11043
For maximum en gine life, never ac-
celerate har d when the en gine is
col d!
UB96E1E0.book Page 2 Monday, July 10, 2017 10:57 AM

Periodic maintenance an d a djustment
6-34
6
If a fuse is blown, replace it as follows.1. Turn the key to “OFF” and turn off the electrical circuit in question.
2. Remove the blown fuse, and then install a new fuse of the specified
amperage. WARNING! Do not
use a fuse of a hi gher ampera ge
ratin g than recommen ded to
avoi d causin g extensive d am-
a g e to the electrical system an d
possi bly a fire.
[EWA15132]
3. Turn the key to “ON” and turn on
the electrical circuit in question to
check if the device operates.
4. If the fuse immediately blows again, have a Yamaha dealer
check the electrical system.
1. ABS motor fuse
2. ABS solenoid fuse
3. Fuel injection system fuse
4. Backup fuse (for clock and immobilizer sys-tem)
5. Electronic throttle valve fuse
6. Headlight fuse
7. Spare fuse
8. Suspension fuse
9. Signaling system fuse
10.Terminal fuse 1 (for auxiliary DC jack)
11.ABS control unit fuse
12.Ignition fuse
13.Right radiator fan motor fuse
14.Left radiator fan motor fuse
15.Hazard fuse
16.Windshield motor fuse
8
1
7
23
4
5
6
7
14
710 9111213
71615
Specified fuses:
Main fuse: 50.0 A
Main fuse 2:
30.0 A
Terminal fuse 1: 3.0 A
Headlight fuse: 7.5 A
Brake light fuse:
1.0 A
Signaling system fuse: 7.5 A
Ignition fuse: 20.0 A
Radiator fan motor fuse:
10.0 A × 2
Backup fuse: 7.5 A
Hazard fuse: 7.5 A
Fuel injection system fuse:
15.0 A
ABS control unit fuse: 7.5 A
ABS motor fuse: 30.0 A
ABS solenoid fuse:
20.0 A
Suspension fuse: 15.0 A
Cruise control fuse: 1.0 A
Windshield motor fuse:
20.0 A
Electronic throttle valve fuse: 7.5 A
UB96E1E0.book Page 34 Monday, July 10, 2017 10:57 AM