2016 YAMAHA YZ250F engine oil

WATER PUMP
6-6
EAS1SM9298REMOVING THE OIL SEAL
TIP
• Remove the oil seal when the coolant level
changes frequently more than usual, coolant
has discolored, or engine oil has become
milky.
• Do not use the removed oil seal.
1. Remove:
• Oil seals “1”
EAS1SM9299CHECKING THE WATER PUMP
1. Check:
• Water pump housing cover
• Impeller shaft
Cracks/damage/wear  Replace.
EAS1SM9300CHECKING THE BEARING
1. Check:
• Bearing
Rotate the inner race with your finger.
Rough spot/seizure  Replace.
EAS1SM9301INSTALLING THE OIL SEAL
1. Install:
• Oil seals “1”
TIP
• Apply the lithium-soap-based grease on the
oil seal lip.
• Install the oil seal with its manufacture’s
marks or numbers facing the right crankcase
cover “2”.2. Install:
• Bearing “1”
TIP
Install the bearing by pressing its outer race
parallel.
EAS1SM9302ASSEMBLING THE WATER PUMP
1. Install:
• Impeller shaft assembly “1”
• Washer “2”
•Pin “3”
• Gear “4”
• Collar “5”
• Circlip “6”
TIP
• Take care so that the oil seal lip is not dam-
aged or the spring does not slip off its posi-
tion.
• When installing the impeller shaft, apply the
engine oil to the oil seal lip, the bearing, and
the impeller shaft.
1 1
New
1 1New
New
LS
LS2
New
1
2
52346
New
E

THROTTLE BODY
7-5
EAS1SM9313
THROTTLE BODY
Removing the throttle body
Order Part name Q’ty Remarks
Seat Refer to “GENERAL CHASSIS” on page 4-1.
Side cover (left/right) Refer to “GENERAL CHASSIS” on page 4-1.
Air scoop (left/right) Refer to “GENERAL CHASSIS” on page 4-1.
Fuel tank Refer to “FUEL TANK” on page 7-1.
ECU Refer to “ENGINE REMOVAL” on page 5-1.
Ignition coil Refer to “ENGINE REMOVAL” on page 5-1.
1 Intake air temperature sensor coupler 1 Disconnect.
2 Air filter case 1
3 Fuel injector coupler 1 Disconnect.
4 Intake air pressure sensor coupler 1 Disconnect.
5 Throttle position sensor coupler 1 Disconnect.
6 Throttle cable cover 1
7 Throttle cable 2
8 Fuel hose 1
9 Exhaust pipe bracket 1
2
1
6
10
11
9
8
3
7
5
4
3.5 Nm (0.35 mkgf, 2.5 ftIbf)T.R.
3.5 Nm (0.35 mkgf, 2.5 ftIbf)T.R.
7 Nm (0.7 mkgf, 5.1 ftIbf)T.R.
3.0 Nm (0.30 mkgf, 2.2 ftIbf)T.R.
10 Nm (1.0 mkgf, 7.2 ftIbf)T.R.

IGNITION SYSTEM
8-3
1. Crankshaft position sensor
2. AC magneto
3. Rectifier/regulator
4. Joint connector
5. Condenser
7. Engine stop switch
9. ECU
10.Ignition coil
11.Spark plug
18.Ignition coil sub-lead

IGNITION SYSTEM
8-4
EAS1SM9321TROUBLESHOOTING
The ignition system fails to operate (no spark or intermittent spark).
TIP
Before troubleshooting, remove the following part(s):
1. Side cover (left/right)
2. Seat
3. Fuel tank
4. Air scoop (left/right)
5. Air filter case cover
1. Check the ignition system wire har-
ness connections.NG 
Reconnect.
OK 
2. Check the spark plug.
Refer to “CHECKING THE SPARK
PLUG” on page 3-36.NG 
Correct or replace the spark plug.
OK 
3. Check the ignition spark gap.
Refer to “CHECKING THE IGNI-
TION SPARK GAP” on page 8-41.OK 
The ignition system circuit is OK.
NG 
4. Check the ignition coil.
Refer to “CHECKING THE IGNI-
TION COIL” on page 8-41.NG 
Replace the ignition coil.
OK 
5. Check the engine stop switch.
Refer to “CHECKING THE
SWITCHES” on page 8-38.NG 
Replace the engine stop switch.
OK 
6. Check the crankshaft position sen-
sor.
Refer to “CHECKING THE CRANK-
SHAFT POSITION SENSOR” on
page 8-42.NG 
Replace the crankshaft position sensor.
OK 
7. Check the stator coil.
Refer to “CHECKING THE STA-
TOR COIL” on page 8-43.NG 
Replace the stator coil.
OK 

FUEL INJECTION SYSTEM
8-23
Fault code 33
SymptomIgnition coil: open or short circuit detected in the primary lead
of the ignition coil.
Fail-safe systemUnable to start engine
Unable to drive vehicle
Diagnostic code No.30
ActuationActuates the ignition coil five times at one-second intervals.
“WARNING” on the Yamaha diagnostic tool blinks five times when-
ever the ignition coil is actuated.
ProcedureCheck that a spark is generated five times.
• Connect an ignition checker.
Or-
derProbable cause of malfunc-
tion and checkMaintenance job Reinstatement method
1 Connection of ignition coil
coupler.
Check the locking condition
of the coupler.
Disconnect the coupler, and
check the pins (for bent or
broken terminals and locking
condition of the pins).Improperly connected 
Connect the coupler secure-
ly, or repair/replace the wire
harness.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
2 Connection of wire harness
ECU coupler.
Check the locking condition
of the coupler.
Disconnect the coupler, and
check the pins (for bent or
broken terminals and locking
condition of the pins).Improperly connected 
Connect the coupler secure-
ly, or repair/replace the wire
harness.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
3 Wire harness continuity. Open or short circuit  Re-
place the wire harness.
Between ignition coil coupler
and ECU coupler.
orange–orangeAfter starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
4 Mounted condition of ignition
coil.
Check for looseness or
pinching.
Check the mounted condition
for correctness.Improperly mounted ignition
coil  Remount or replace
the ignition coil.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
5 Defective ignition coil (test
the primary coils for continu-
ity).Check the primary resistance
of the ignition coil.
“CHECKING THE IGNITION
COIL” on page 8-41.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.

FUEL INJECTION SYSTEM
8-24
TIP
Disconnect the fuel pump coupler when this diagnostic tool is used. 6 Faulty ECU Execute the diagnostic mode.
(Code No. 30)
No spark  Replace the
ECU.
Fault code 39
Symptom Injector: open or short circuit detected.
Fail-safe systemUnable to start engine
Unable to drive vehicle
Diagnostic code No.36
ActuationActuates injector five times at one-second intervals.
“WARNING” on the Yamaha diagnostic tool blinks five times when
the injector is actuated.
ProcedureCheck that injector is actuated five times by listening for the oper-
ating sound.
Or-
derProbable cause of malfunc-
tion and checkMaintenance job Reinstatement method
1 Connection of injector cou-
pler.
Check the locking condition
of the coupler.
Disconnect the coupler, and
check the pins (for bent or
broken terminals and locking
condition of the pins).Improperly connected 
Connect the coupler secure-
ly, or repair/replace the wire
harness.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
2 Defective injector. Check the injector.
“CHECKING THE FUEL IN-
JECTOR” on page 8-47.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order.
3 Connection of wire harness
ECU coupler.
Check the locking condition
of the coupler.
Disconnect the coupler, and
check the pins (for bent or
broken terminals and locking
condition of the pins).Improperly connected 
Connect the coupler secure-
ly, or repair/replace the wire
harness.After starting the engine, idle
this and wait about 5 sec-
onds.
Fault code No. is not dis-
played  Repair is finished.
Fault code No. is displayed 
Go to next order. Fault code 33
SymptomIgnition coil: open or short circuit detected in the primary lead
of the ignition coil.

ELECTRICAL COMPONENTS
8-41
EAS1SM9334CHECKING THE IGNITION SPARK GAP
1. Check:
• Ignition spark gap
Out of specification  Perform the ignition
system troubleshooting.
Refer to “TROUBLESHOOTING” on page 8-
4.
TIP
If the ignition spark gap is within specification,
the ignition system circuit is operating normally.
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a. Remove the spark plug cap from the spark
plug.
b. Connect the ignition checker “1”.
c. Crank the engine, and measure the ignition
spark gap “a”.
d. Crank the engine, and gradually increase
the spark gap until a misfire occurs.
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EAS1SM9335CHECKING THE SPARK PLUG CAP
1. Remove:
• Spark plug cap
(from the spark plug lead)
2. Check:
• Spark plug cap resistance
Out of specification  Replace.
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a. Connect the pocket tester ( 1k) to the
spark plug cap.
b. Measure the spark plug cap resistance.
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EAS1SM9336CHECKING THE IGNITION COIL
1. Disconnect:
• Ignition coil terminal
(from the sub wire harness)
• Spark plug cap
(from the ignition coil)
2. Check:
• Primary coil resistance
Out of specification  Replace.
▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼▼
a. Connect the pocket tester ( 1) to the igni-
tion coil. Minimum ignition spark gap
6.0 mm (0.24 in)
Ignition checker
90890-06754
Oppama pet-4000 spark checker
YM-34487
2. Spark plug cap
Resistance
10.00 k
Pocket tester
90890-03112
Analog pocket tester
YU-03112-C
Primary coil resistance
2.16–2.64 
Pocket tester
90890-03112
Analog pocket tester
YU-03112-C
• Positive tester probe 
Ignition coil terminal 1 “1”
• Negative tester probe 
Ignition coil terminal 2 “2”

ELECTRICAL COMPONENTS
8-43
EAS1SM9338CHECKING THE ECU
1. Check:
• Mounted condition of ECU.
Improperly mounted  Remount.
TIP
• The lean angle sensor is built into the ECU.
• The lean angle sensor stops the engine in
case of a turnover.
• To ensure that the lean angle sensor operates
correctly, do not change the installed condi-
tion of the ECU.
EAS1SM9339CHECKING THE STATOR COIL
1. Disconnect:
• Stator coil coupler
(from the wire harness)
2. Check:
• Stator coil resistance
Out of specification  Replace.
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a. Connect the pocket tester ( 1) to the sta-
tor coil coupler.
b. Measure the stator coil resistance.
▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲▲
EAS1SM9340CHECKING THE RECTIFIER/REGULATOR
1. Check:
• Rectifier/regulator output voltage
Out of specification  Replace.
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a. Set the digital tachometer to the ignition coil.
b. Connect the pocket tester (20 VDC) to the
rectifier/regulator coupler.
c. Start the engine and let it run at about 5000
r/min.
d. Measure the output voltage.
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Stator coil resistance
0.624–0.936 
Pocket tester
90890-03112
Analog pocket tester
YU-03112-C
• Positive tester probe 
White “1”
• Negative tester probe 
White “2”
12
No load regulated voltage
14.1–14.9 V
Digital tachometer
90890-06760
YU-39951-B
Pocket tester
90890-03112
Analog pocket tester
YU-03112-C
• Positive tester probe 
Red “1”
• Negative tester probe 
Black “2”
21
B
WWR