2016 YAMAHA XJR 1300 check engine

Table of contentsSafety information ............................ 1-1
Description ....................................... 2-1
Left view ......................................... 2-1
Right view ....................................... 2-2
Controls and instruments ............... 2-3
Instrument an d control functions ... 3-1
Immobilizer system......................... 3-1
Main switch/steering lock............... 3-2
Indicator lights and warning lights............................................ 3-4
Speedometer .................................. 3-5
Tachometer .................................... 3-5
Multi-function display ..................... 3-6
Handlebar switches ........................ 3-9
Clutch lever .................................. 3-10
Shift pedal .................................... 3-11
Brake lever.................................... 3-11
Brake pedal .................................. 3-12
Fuel tank cap ................................ 3-12
Fuel ............................................... 3-13
Fuel tank breather hose and overflow hose ............................ 3-14
Catalytic converters ..................... 3-14
Seat .............................................. 3-15
Adjusting the front fork ................. 3-16
Adjusting the shock absorber assembly ................................... 3-18
Luggage strap holders ................. 3-20
EXUP system ................................ 3-21 Sidestand ...................................... 3-21
Ignition circuit cut-off system ....... 3-22
For your safety – pre-operation
checks ............................................... 4-1
Operation an d important ri din g
points ................................................. 5-1
Starting the engine .......................... 5-1
Shifting ............................................ 5-2
Tips for reducing fuel consumption ................................ 5-3
Engine break-in ............................... 5-3
Parking ............................................ 5-4
Perio dic maintenance an d
a d justment ........................................ 6-1
Owner’s tool kit ............................... 6-2
Periodic maintenance chart for the emission control system .............. 6-3
General maintenance and lubrication chart ........................... 6-4
Removing and installing panels ...... 6-8
Checking the spark plugs ............... 6-9
Engine oil and oil filter element ..... 6-10
Replacing the air filter element
and cleaning the check hose..... 6-13
Checking the throttle grip free play ............................................ 6-15
Valve clearance ............................. 6-15
Tires .............................................. 6-15 Cast wheels .................................. 6-18
Clutch lever................................... 6-18
Checking the brake lever free
play ............................................ 6-18
Brake light switches ..................... 6-19
Checking the front and rear brake
pads .......................................... 6-19
Checking the brake and clutch
fluid levels.................................. 6-20
Changing the brake and clutch fluids .......................................... 6-21
Drive chain slack........................... 6-22
Cleaning and lubricating the drive chain ................................. 6-23
Checking and lubricating the cables ........................................ 6-24
Checking and lubricating the
throttle grip and cable ............... 6-24
Checking and lubricating the brake and shift pedals............... 6-24
Checking and lubricating the brake and clutch levers ............. 6-25
Checking and lubricating the
sidestand................................... 6-26
Lubricating the swingarm pivots......................................... 6-26
Checking the front fork ................. 6-26
Checking the steering................... 6-27
Checking the wheel bearings ....... 6-27
Battery .......................................... 6-28
Replacing the fuses ...................... 6-29U2PNE1E0.book Page 1 Monday, December 28, 2015 11:03 AM

Safety information
1-3
1Avoi
d Car bon Monoxi de Poisonin g
All engine exhaust contains carbon
monoxide, a deadly gas. Breathing
carbon monoxide can cause head-
aches, dizziness, drowsiness, nausea,
confusion, and eventually death.
Carbon Monoxide is a colorless, odor-
less, tasteless gas which may be pres-
ent even if you do not see or smell any
engine exhaust. Deadly levels of car-
bon monoxide can collect rapidly and
you can quickly be overcome and un-
able to save yourself. Also, deadly lev-
els of carbon monoxide can linger for
hours or days in enclosed or poorly
ventilated areas. If you experience any
symptoms of carbon monoxide poi-
soning, leave the area immediately, get
fresh air, and SEEK MEDICAL TREAT-
MENT.  Do not run engine indoors. Even if
you try to ventilate engine exhaust
with fans or open windows and
doors, carbon monoxide can rap-
idly reach dangerous levels.
 Do not run engine in poorly venti-
lated or partially enclosed areas
such as barns, garages, or car-
ports. 
Do not run engine outdoors where
engine exhaust can be drawn into
a building through openings such
as windows and doors.
Loa din g
Adding accessories or cargo to your
motorcycle can adversely affect stabil-
ity and handling if the weight distribu-
tion of the motorcycle is changed. To
avoid the possibility of an accident, use
extreme caution when adding cargo or
accessories to your motorcycle. Use
extra care when riding a motorcycle
that has added cargo or accessories.
Here, along with the information about
accessories below, are some general
guidelines to follow if loading cargo to
your motorcycle:
The total weight of the operator, pas-
senger, accessories and cargo must
not exceed the maximum load limit.
Operation of an overloa ded vehicle
coul d cause an acci dent. When loading within this weight limit,
keep the following in mind:
 Cargo and accessory weight
should be kept as low and close to
the motorcycle as possible. Se-
curely pack your heaviest items as
close to the center of the vehicle
as possible and make sure to dis-
tribute the weight as evenly as
possible on both sides of the mo-
torcycle to minimize imbalance or
instability.
 Shifting weights can create a sud-
den imbalance. Make sure that
accessories and cargo are se-
curely attached to the motorcycle
before riding. Check accessory
mounts and cargo restraints fre-
quently.
• Properly adjust the suspension for your load (suspension-ad-
justable models only), and
check the condition and pres-
sure of your tires.
• Never attach any large or heavy items to the handlebar, front
fork, or front fender. These
items, including such cargo as
sleeping bags, duffel bags, or
Maximum loa d:
210 kg (463 lb)
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Safety information
1-5
1operator and may limit control
ability, therefore, such accesso-
ries are not recommended.
 Use caution when adding electri-
cal accessories. If electrical ac-
cessories exceed the capacity of
the motorcycle’s electrical sys-
tem, an electric failure could re-
sult, which could cause a
dangerous loss of lights or engine
power.
Aftermarket Tires an d Rims
The tires and rims that came with your
motorcycle were designed to match
the performance capabilities and to
provide the best combination of han-
dling, braking, and comfort. Other
tires, rims, sizes, and combinations
may not be appropriate. Refer to page
6-15 for tire specifications and more in-
formation on replacing your tires.
Transportin g the Motorcycle
Be sure to observe following instruc-
tions before transporting the motorcy-
cle in another vehicle.  Remove all loose items from the
motorcycle. 
Check that the fuel cock (if
equipped) is in the “OFF” position
and that there are no fuel leaks.
 Point the front wheel straight
ahead on the trailer or in the truck
bed, and choke it in a rail to pre-
vent movement.
 Shift the transmission in gear (for
models with a manual transmis-
sion).
 Secure the motorcycle with tie-
downs or suitable straps that are
attached to solid parts of the mo-
torcycle, such as the frame or up-
per front fork triple clamp (and not,
for example, to rubber-mounted
handlebars or turn signals, or
parts that could break). Choose
the location for the straps carefully
so the straps will not rub against
painted surfaces during transport.
 The suspension should be com-
pressed somewhat by the tie-
downs, if possible, so that the mo-
torcycle will not bounce exces-
sively during transport.
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Description
2-2
2
EAU10421
Right view
2
6
3
1
4
5
7
8
9
10
11
1. Owner’s tool kit (page 6-2)
2. Rear brake fluid reservoir (page 6-20)
3. Battery (page 6-28)
4. Air filter element (page 6-13)
5. Fuel tank cap (page 3-12)
6. Headlight (page 6-30)
7. Engine oil filler cap (page 6-10)
8. Engine oil drain bolt (page 6-10) 9. Engine oil level check window (page 6-10)
10.Brake pedal (page 3-12)
11.Rear brake light switch (page 6-19)U2PNE1E0.book Page 2 Monday, December 28, 2015 11:03 AM

Instrument and control functions
3-4
3
EAU49398
In dicator lig hts and warning
lig hts
EAU11032
Turn si gnal in dicator li ghts “ ”
an d“”
Each indicator light will flash when its
corresponding turn signal lights are
flashing.
EAU11061
Neutral in dicator li ght “ ”
This indicator light comes on when the
transmission is in the neutral position.
EAU11081
Hi gh beam in dicator li ght “ ”
This indicator light comes on when the
high beam of the headlight is switched
on.
EAU11124
Oil level warnin g lig ht “ ”
This warning light comes on if the en-
gine oil level is low.
The electrical circuit of the warning
light can be checked by turning the key
to “ON”. The warning light should
come on for a few seconds, and then
go off.
If the warning light does not come on
initially when the key is turned to “ON”,
or if the warning light remains on, have
a Yamaha dealer check the electrical
circuit.
TIPEven if the oil level is sufficient, the
warning light may flicker when riding
on a slope or during sudden accelera-
tion or deceleration, but this is not a
malfunction.
EAU59110
En gine trou ble warnin g li ght “ ”
This warning light comes on or flashes
if a problem is detected in the electrical
circuit monitoring the engine. If this oc-
curs, have a Yamaha dealer check the
self-diagnosis system. (See page 3-7
for an explanation of the self-diagnosis
device.)
The electrical circuit of the warning
light can be checked by turning the key
to “ON”. The warning light should
come on for a few seconds, and then
go off.
If the warning light does not come on
initially when the key is turned to “ON”,
or if the warning light remains on, have
a Yamaha dealer check the electrical
circuit.
1. Left turn signal indicator light “ ”
2. Engine trouble warning light “ ”
3. Neutral indicator light “ ”
4. Oil level warning light “ ”
5. High beam indicator light “ ”
6. Right turn signal indicator light “ ”
7. Immobilizer system indicator light
123
456
7
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Instrument and control functions
3-5
3
TIPThe engine trouble warning light will
come on while the start switch is
pushed, but this does not indicate a
malfunction.
EAU38626
Immo bilizer system in dicator li ght
When the key is turned to “OFF” and
30 seconds have passed, the indicator
light will start flashing indicating the im-
mobilizer system is enabled. After 24
hours have passed, the indicator light
will stop flashing, however the immobi-
lizer system is still enabled.
The electrical circuit of the indicator
light can be checked by turning the key
to “ON”. The indicator light should
come on for a few seconds, and then
go off.
If the indicator light does not come on
initially when the key is turned to “ON”,
or if the indicator light remains on, have
a Yamaha dealer check the electrical
circuit.
The self-diagnosis device also detects
problems in the immobilizer system
circuits. (See page 3-7 for an explana-
tion of the self-diagnosis device.)
EAU11602
Speed ometerThe speedometer shows the riding
speed.
When the key is turned to “ON”, the
speedometer needle will sweep once
across the speed range and then re-
turn to zero in order to test the electri-
cal circuit.
EAU11873
TachometerThe electric tachometer allows the rid-
er to monitor the engine speed and
keep it within the ideal power range.
When the key is turned to “ON”, the ta-
chometer needle will sweep once
across the r/min range and then return
to zero r/min in order to test the electri-
cal circuit.NOTICE
ECA10032
Do not operate the en gine in the ta-
chometer red zone.
Re d zone: 9500 r/min an d a bove
1. Speedometer
1
1. Tachometer
2. Tachometer red zone
1
2
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Instrument and control functions
3-7
3 self automatically and the display will
return to the prior mode after refueling
and traveling 5 km (3 mi).
Fuel meter
The fuel meter indicates the amount of
fuel in the fuel tank. The display seg-
ments of the fuel meter disappear from
“F” (full) towards “E” (empty) as the fuel
level decreases. When the fuel level
warning indicator “ ” starts flashing,
refuel as soon as possible.
TIPThis fuel meter is equipped with a self-
diagnosis system. If a problem is de-
tected in the electrical circuit, all the display segments and symbol “ ” will
flash repeatedly. If this occurs, have a
Yamaha dealer check the electrical cir- cuit.
Clock mo de
The clock uses a 12-hour time system.
To set the clock1. Turn the key to “ON”.
2. Push the select button and reset button together for two seconds.
The hour digits start flashing.
3. Use the reset button to set the hours. 4. Push the select button, and the
minute digits will start flashing.
5. Use the reset button to set the mi- nutes.
6. Push the select button and then release it to start the clock.
Self-d iagnosis device
This model is equipped with a self-di-
agnosis device for various electrical
circuits.
If a problem is detected in any of those
circuits, the engine trouble warning
light will come on and the odome-
ter/tripmeter display will indicate an er-
ror code.
1. Fuel level warning indicator “ ”
2. Fuel meter
2
1
1. Clock
2. Select button
3. Reset button
1
2
3
1. Engine trouble warning light “ ”
2. Error code display
3. Immobilizer system indicator light
1
2
3
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Instrument and control functions
3-8
3
If the display indicates any error codes,
note the code number, and then have
a Yamaha dealer check the vehicle.
The self-diagnosis device also detects
problems in the immobilizer system
circuits.
If a problem is detected in the immobi-
lizer system circuits, the immobilizer
system indicator light will flash and the
display will indicate an error code.
TIPIf the display indicates error code 52,
this could be caused by transponder
interference. If this error code appears,
try the following.1. Use the code re-registering key to
start the engine.TIPMake sure there are no other immobi-
lizer keys close to the main switch, and
do not keep more than one immobilizer
key on the same key ring! Immobilizer
system keys may cause signal interfer-
ence, which may prevent the engine
from starting.
2. If the engine starts, turn it off andtry starting the engine with the
standard keys.
3. If one or both of the standard keys do not start the engine, take the
vehicle, the code re-registering
key and both standard keys to a
Yamaha dealer and have the stan- dard keys re-registered.NOTICE
ECA11791
If the multi-function display in di-
cates an error co de, the vehicle
shoul d b e checked as soon as pos-
si ble in or der to avoi d en gine dam-
a g e.
Brig htness control mo de
This function allows you to adjust the
brightness of the multi-function dis-
play, speedometer and tachometer to
suit the outside lighting conditions.
To adjust the brightness1. Turn the key to “OFF”.
2. Push and hold the select button.
3. Turn the key to “ON”, and then re- lease the select button after five
seconds.
4. Push the reset button to select the desired brightness level.
5. Push the select button to confirm the selected brightness level.1. Brightness level display
2. Select button
3. Reset button
1
2
3
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