2009 YAMAHA YZF-R6 check engine

TABLE OF CONTENTSSAFETY INFORMATION ..................1-1
DESCRIPTION ..................................2-1
Left view ..........................................2-1
Right view ........................................2-2
Controls and instruments.................2-3
INSTRUMENT AND CONTROL
FUNCTIONS.......................................3-1
Immobilizer system .........................3-1
Main switch/steering lock ................3-2
Indicator and warning lights ............3-4
Multi-function meter unit .................3-7
Anti-theft alarm (optional) .............3-13
Handlebar switches ......................3-14
Clutch lever ...................................3-15
Shift pedal .....................................3-15
Brake lever ...................................3-16
Brake pedal ..................................3-16
Fuel tank cap ................................3-17
Fuel ...............................................3-17
Fuel tank breather/overflow
hose ..........................................3-19
Catalytic converters ......................3-19
Seats ............................................3-20
Helmet holding cable ....................3-21
Adjusting the front fork ..................3-22
Adjusting the shock absorber
assembly ...................................3-24
Luggage strap holders ..................3-27
EXUP system ...............................3-27Sidestand ..................................... 3-28
Ignition circuit cut-off system ........ 3-28
FOR YOUR SAFETY –
PRE-OPERATION CHECKS............. 4-1
Pre-operation check list .................. 4-2
OPERATION AND IMPORTANT
RIDING POINTS................................. 5-1
Starting the engine ......................... 5-1
Shifting ........................................... 5-2
Tips for reducing fuel
consumption ............................... 5-3
Engine break-in .............................. 5-3
Parking ........................................... 5-4
PERIODIC MAINTENANCE AND
ADJUSTMENT................................... 6-1
Owner’s tool kit ............................... 6-1
Periodic maintenance and
lubrication chart .......................... 6-2
Removing and installing cowlings
and panels .................................. 6-7
Checking the spark plugs ............. 6-11
Engine oil and oil filter cartridge ... 6-12
Coolant ......................................... 6-15
Air filter element ........................... 6-18
Checking the engine idling
speed ........................................ 6-18
Checking the throttle cable free
play ........................................... 6-19Valve clearance ........................... 6-19
Tires ............................................. 6-19
Cast wheels ................................. 6-22
Adjusting the clutch lever free
play ........................................... 6-22
Adjusting the rear brake light
switch ....................................... 6-23
Checking the front and rear brake
pads .......................................... 6-23
Checking the brake fluid level ...... 6-24
Changing the brake fluid .............. 6-25
Drive chain slack .......................... 6-25
Cleaning and lubricating the
drive chain ................................ 6-27
Checking and lubricating the
cables ....................................... 6-27
Checking and lubricating the
throttle grip and cable ............... 6-28
Checking and lubricating the
brake and shift pedals .............. 6-28
Checking and lubricating the
brake and clutch levers ............ 6-29
Checking and lubricating the
sidestand .................................. 6-29
Lubricating the swingarm
pivots ........................................ 6-30
Checking the front fork ................. 6-30
Checking the steering .................. 6-31
Checking the wheel bearings ....... 6-31
Battery ......................................... 6-31
Replacing the fuses ..................... 6-33U13SE1E0.book Page 1 Monday, July 7, 2008 1:43 PM

SAFETY INFORMATION
1-3
1


Do not run engine in poorly venti-
lated or partially enclosed areas
such as barns, garages, or car-
ports.


Do not run engine outdoors where
engine exhaust can be drawn into
a building through openings such
as windows and doors.
Loading
Adding accessories or cargo to your
motorcycle can adversely affect stabili-
ty and handling if the weight distribution
of the motorcycle is changed. To avoid
the possibility of an accident, use ex-
treme caution when adding cargo or
accessories to your motorcycle. Use
extra care when riding a motorcycle
that has added cargo or accessories.
Here, along with the information about
accessories below, are some general
guidelines to follow if loading cargo to
your motorcycle:
The total weight of the operator, pas-
senger, accessories and cargo must
not exceed the maximum load limit.
Operation of an overloaded vehicle
could cause an accident.When loading within this weight limit,
keep the following in mind:


Cargo and accessory weight
should be kept as low and close to
the motorcycle as possible. Se-
curely pack your heaviest items as
close to the center of the vehicle as
possible and make sure to distrib-
ute the weight as evenly as possi-
ble on both sides of the motorcycle
to minimize imbalance or instabili-
ty.


Shifting weights can create a sud-
den imbalance. Make sure that ac-
cessories and cargo are securely
attached to the motorcycle before
riding. Check accessory mounts
and cargo restraints frequently.
Properly adjust the suspension
for your load (suspension-ad-
justable models only), and
check the condition and pres-
sure of your tires.
Never attach any large or heavy
items to the handlebar, front
fork, or front fender. Theseitems, including such cargo as
sleeping bags, duffel bags, or
tents, can create unstable han-
dling or a slow steering re-
sponse.


This vehicle is not designed to
pull a trailer or to be attached to
a sidecar.
Genuine Yamaha Accessories
Choosing accessories for your vehicle
is an important decision. Genuine
Yamaha accessories, which are avail-
able only from a Yamaha dealer, have
been designed, tested, and approved
by Yamaha for use on your vehicle.
Many companies with no connection to
Yamaha manufacture parts and acces-
sories or offer other modifications for
Yamaha vehicles. Yamaha is not in a
position to test the products that these
aftermarket companies produce.
Therefore, Yamaha can neither en-
dorse nor recommend the use of ac-
cessories not sold by Yamaha or
modifications not specifically recom-
mended by Yamaha, even if sold and
installed by a Yamaha dealer.
Maximum load:
190 kg (419 lb)
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INSTRUMENT AND CONTROL FUNCTIONS
3-4
3
EAU11003
Indicator and warning lights
EAU11030
Turn signal indicator lights“”
and“”
The corresponding indicator light flash-
es when the turn signal switch is
pushed to the left or right.
EAU11060
Neutral indicator light“”
This indicator light comes on when the
transmission is in the neutral position.
EAU11080
High beam indicator light“”
This indicator light comes on when the
high beam of the headlight is switched
on.
EAU11252
Oil level warning light“”
This warning light comes on if the en-
gine oil level is low.
The electrical circuit of the warning light
can be checked by turning the key to
“ON”.
If the warning light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-
cuit.TIP

Even if the oil level is sufficient, the
warning light may flicker when
riding on a slope or during sudden
acceleration or deceleration, but
this is not a malfunction.


This model is also equipped with a
self-diagnosis device for the oil
level detection circuit. If a problem
is detected in the oil level detection
circuit, the following cycle will be
repeated until the malfunction is
corrected: The oil level warning
light will flash ten times, then go off
for 2.5 seconds. If this occurs,
have a Yamaha dealer check thevehicle.
EAU11363
Fuel level warning light“”
This warning light comes on when the
fuel level drops below approximately
3.5 L (0.92 US gal, 0.77 Imp.gal). When
this occurs, refuel as soon as possible.
The electrical circuit of the warning light
can be checked by turning the key to
“ON”.
If the warning light does not come on
for a few seconds, and then go off,
have a Yamaha dealer check the elec-
trical circuit.
1. Left turn signal indicator light“”
2. Neutral indicator light“”
3. High beam indicator light“”
4. Right turn signal indicator light“”
5. Fuel level warning light“”
6. Oil level warning light“”
7. Coolant temperature warning light“”
8. Shift timing indicator light
9. Engine trouble warning light“”
10.Immobilizer system indicator light
km/h
TRIP A
˚C
12 34 5
6
7
8
9 10
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INSTRUMENT AND CONTROL FUNCTIONS
3-5
3
TIPThis model is also equipped with a self-
diagnosis device for the fuel level de-
tection circuit. If a problem is detected
in the fuel level detection circuit, the fol-
lowing cycle will be repeated until the
malfunction is corrected: The fuel level
warning light will flash eight times, and
then go off for 3.0 seconds. If this oc-
curs, have a Yamaha dealer check thevehicle.
EAU11425
Coolant temperature warning
light“”
This warning light comes on if the en-
gine overheats. If this occurs, stop the
engine immediately and allow the en-
gine to cool.
The electrical circuit of the warning light
can be checked by turning the key to
“ON”.
If the warning light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-
cuit.
NOTICE
ECA10021
Do not continue to operate the en-gine if it is overheating.TIP

For radiator-fan-equipped vehi-
cles, the radiator fan(s) automati-
cally switch on or off according to
the coolant temperature in the ra-
diator.


If the engine overheats, see page6-43 for further instructions.
U13SE1E0.book Page 5 Monday, July 7, 2008 1:43 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-7
3
EAU42772
Engine trouble warning light“”
This warning light comes on if a prob-
lem is detected in the electrical circuit
monitoring the engine. If this occurs,
have a Yamaha dealer check the self-
diagnosis system. (See page 3-10 for
an explanation of the self-diagnosis de-
vice.)
The electrical circuit of the warning light
can be checked by turning the key to
“ON”. If the warning light does not come
on for a few seconds, then go off, have
a Yamaha dealer check the electrical
circuit.
EAU11572
Shift timing indicator light
This indicator light can be set to come
on and go off at the desired engine
speeds and is used to inform the rider
when it is time to shift to the next higher
gear.
The electrical circuit of the indicator
light can be checked by turning the key
to “ON”.
If the indicator light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-cuit. (See page 3-11 for a detailed ex-
planation of the function of this indicator
light and on how to set it.)
EAU38621
Immobilizer system indicator light
The electrical circuit of the indicator
light can be checked by turning the key
to “ON”.
If the indicator light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-
cuit.
When the key is turned to “OFF” and 30
seconds have passed, the indicator
light will start flashing indicating the im-
mobilizer system is enabled. After 24
hours have passed, the indicator light
will stop flashing, however the immobi-
lizer system is still enabled.
This model is also equipped with a self-
diagnosis device for the immobilizer
system. (See page 3-10 for an explana-
tion of the self-diagnosis device.)
EAU39044
Multi-function meter unit
WARNING
EWA12422
Be sure to stop the vehicle before
making any setting changes to the
multi-function meter unit. Changing
settings while riding can distract the
operator and increase the risk of anaccident.1. Clock
2. Speedometer
3.“SELECT” button
4.“RESET” button
5. Tachometer
6. Coolant temperature display/air intake tem-
perature display
7. Odometer/tripmeters/fuel reserve tripme-
ter/stopwatch
8. Shift timing indicator light
U13SE1E0.book Page 7 Monday, July 7, 2008 1:43 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-11
3 If a problem is detected in the immobi-
lizer system circuits, the immobilizer
system indicator light will flash and the
right display will indicate a two-digit er-
ror code.
TIPIf the right display indicates error code
52, this could be caused by transpon-
der interference. If this error code ap-pears, try the following.
1. Use the code re-registering key to
start the engine.TIPMake sure there are no other immobi-
lizer keys close to the main switch, and
do not keep more than one immobilizer
key on the same key ring! Immobilizer
system keys may cause signal interfer-
ence, which may prevent the enginefrom starting.
2. If the engine starts, turn it off and
try starting the engine with the
standard keys.
3. If one or both of the standard keys
do not start the engine, take the
vehicle, the code re-registeringkey and both standard keys to a
Yamaha dealer and have the stan-
dard keys re-registered.
If the right display indicates any error
codes, note the code number, and then
have a Yamaha dealer check the vehi-
cle.
NOTICE
ECA11590
If the display indicates an error
code, the vehicle should be checked
as soon as possible in order to avoidengine damage.Display brightness and shift timing
indicator light control mode
This mode cycles through five control
functions, allowing you to make the fol-
lowing settings in the order listed be-
low.


Display brightness:
This function allows you to adjust
the brightness of the displays and
tachometer to suit the outside
lighting conditions.
1. Display brightness
2. Shift timing indicator light activation/deacti-
vation
3. Shift timing indicator light
4. Brightness level
km/h
2
1
4
3
1
U13SE1E0.book Page 11 Monday, July 7, 2008 1:43 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-19
3
EAU39451
Fuel tank breather/overflow
hose Before operating the motorcycle:

Check the fuel tank breather/over-
flow hose connection.


Check the fuel tank breather/over-
flow hose for cracks or damage,
and replace it if damaged.


Make sure that the end of the fuel
tank breather/overflow hose is not
blocked, and clean it if necessary.
EAU13444
Catalytic converters This vehicle is equipped with catalytic
converters in the exhaust system.
WARNING
EWA10861
The exhaust system is hot after op-
eration. To prevent a fire hazard or
burns:

Do not park the vehicle near
possible fire hazards such as
grass or other materials that
easily burn.


Park the motorcycle in a place
where pedestrians or children
are not likely to touch the hot
exhaust system.


Make sure that the exhaust sys-
tem has cooled down before do-
ing any maintenance work.


Do not allow the engine to idle
more than a few minutes. Long
idling can cause a build-up ofheat.
NOTICE
ECA10701
Use only unleaded gasoline. The use
of leaded gasoline will cause unre-
pairable damage to the catalyticconverter.
1. Fuel tank breather/overflow hose
U13SE1E0.book Page 19 Monday, July 7, 2008 1:43 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-28
3
EAU15301
Sidestand The sidestand is located on the left side
of the frame. Raise the sidestand or
lower it with your foot while holding the
vehicle upright.TIPThe built-in sidestand switch is part of
the ignition circuit cut-off system, which
cuts the ignition in certain situations.
(See further down for an explanation ofthe ignition circuit cut-off system.)
WARNING
EWA10240
The vehicle must not be ridden with
the sidestand down, or if the side-
stand cannot be properly moved up
(or does not stay up), otherwise the
sidestand could contact the ground
and distract the operator, resulting
in a possible loss of control.
Yamaha’s ignition circuit cut-off
system has been designed to assist
the operator in fulfilling the respon-
sibility of raising the sidestand be-
fore starting off. Therefore, check
this system regularly as describedbelow and have a Yamaha dealer re-
pair it if it does not function proper-
ly.
EAU44891
Ignition circuit cut-off system The ignition circuit cut-off system (com-
prising the sidestand switch, clutch
switch and neutral switch) has the fol-
lowing functions.

It prevents starting when the trans-
mission is in gear and the side-
stand is up, but the clutch lever is
not pulled.


It prevents starting when the trans-
mission is in gear and the clutch le-
ver is pulled, but the sidestand is
still down.


It cuts the running engine when the
transmission is in gear and the sid-
estand is moved down.
Periodically check the operation of the
ignition circuit cut-off system according
to the following procedure.
U13SE1E0.book Page 28 Monday, July 7, 2008 1:43 PM