2006 YAMAHA FJR1300AS transmission

INSTRUMENT AND CONTROL FUNCTIONS
3-1
3
EAU40472
YCC-S system This vehicle features the YCC-S
(Yamaha Chip Controlled-Shift) sys-
tem.
The basic function of this system allows
the rider to shift gears without the use of
a clutch lever. Furthermore, a shift lever
is equipped on the handlebar, allowing
the rider to choose to shift gears either
with the shift pedal or by hand.
When the engine is started and the shift
pedal or the shift lever is moved, a sig-
nal is sent to the MCU (Motor Control
Unit) which disengages the clutch, then
the shift is made. The MCU engages
the clutch once the engine is running at
the proper speed. Clutch engagement
is controlled optimally by the MCU ac-
cording to engine r/min, engine require-
ments, and riding conditions. See
“Handlebar switches” (page 3-15) and
OPERATION AND IMPORTANT
RIDING POINTS (page 5-1) for further
explanation of this system.
NOTE:This is not an automatic transmission,
only the clutch system is automatic.The gears must be shifted by the rider.
EAU10972
Immobilizer system This vehicle is equipped with an immo-
bilizer system to help prevent theft by
re-registering codes in the standard
keys. This system consists of the fol-
lowing.

a code re-registering key (with a
red bow)


two standard keys (with a black
bow) that can be re-registered with
new codes


a transponder (which is installed in
the code re-registering key)


an immobilizer unit


an ECU
1. Code re-registering key (red bow)
2. Standard keys (black bow)
U2D2EAE0.book Page 1 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-4
3
EAU39460
(Parking)
The steering is locked, and the tail-
lights, license plate light and auxiliary
lights are on. The hazard lights and turn
signal lights can be turned on, but all
other electrical systems are off. The
key can be removed.
The steering must be locked before the
key can be turned to “”.
CAUTION:
ECA11020
Do not use the parking position for
an extended length of time, other-wise the battery may discharge.
EAU11003
Indicator and warning lights
EAU11030
Turn signal indicator lights “” and
“”
The corresponding indicator light flash-
es when the turn signal switch is
pushed to the left or right.
EAU11060
Neutral indicator light “”
This indicator light comes on when the
transmission is in the neutral position.
EAU11080
High beam indicator light “”
This indicator light comes on when the
high beam of the headlight is switched
on.
EAU11120
Oil level warning light “”
This warning light comes on when the
engine oil level is low.
The electrical circuit of the warning light
can be checked by turning the key to
“ON”.
If the warning light does not come on
for a few seconds, then go off, have a
Yamaha dealer check the electrical cir-
cuit.NOTE:Even if the oil level is sufficient, the
warning light may flicker when riding on
a slope or during sudden acceleration
or deceleration, but this is not a mal-function.
1. Left turn signal indicator light “”
2. Right turn signal indicator light “”
3. Engine trouble “”/YCC-S “” indi-
cators and warning light
4. Anti-lock Brake System (ABS) warning light
“”
5. Neutral indicator light “”
6. High beam indicator light “”
7. Oil level warning light “”
8. Immobilizer system indicator light
SHIFT
ABS
U2D2EAE0.book Page 4 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-5
3
EAU40512
Engine trouble “”/YCC-S
“” indicators and warning
light
Engine trouble indicator “” andwarning lightThis indicator is displayed and the
warning light comes on or flashes when
an electrical circuit monitoring the en-
gine is defective. When this occurs,
have a Yamaha dealer check the self-
diagnosis system. (See page 3-7 for an
explanation of the self-diagnosis de-
vice.)YCC-S indicator “” and warning
lightThis indicator is displayed and the
warning light comes on if there is a mal-
function in the YCC-S. If this occurs:

YCC-S is disabled, so it will be im-
possible to shift out of the gear you
are in


the clutch may stay engaged, so a
shuddering sensation may be felt
as you come to a stop
Stop the vehicle when it is safe to do so,
and park it away from traffic. Have a
Yamaha dealer check the YCC-S.
NOTE:In order to be able to move the vehicle
after it has stopped, if shifting is impos-
sible using the hand shift lever and shift
pedal, proceed as follows:
Place the vehicle on the centerstand,
then while rotating the rear wheel, push
the shift pedal rod and pivot forward un-
til the transmission is in the neutral po-sition.
The electrical circuit of the indicators
and warning light can be checked by
turning the key to “ON”. If the indicators
and warning light do not come on for a
1. Engine trouble indicator “” and warning
lightSHIFT
1. YCC-S indicator “” and warning light
SHIFTSHIFT
1. Shift pedal rod pivot
2. Shift pedal rod
U2D2EAE0.book Page 5 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-8
3


a fuel reserve tripmeter (which
shows the distance traveled on the
fuel reserve)


a clock


a fuel meter


a coolant temperature meter


a transmission gear display


an ambient temperature display


a fuel consumption display (instan-
taneous and average consumption
functions)


a self-diagnosis device
NOTE:Be sure to turn the key to “ON” before
using the “SELECT” and “RESET” but-tons.Odometer and tripmeter modes
Pushing the “SELECT” button switches
the display between the odometer
mode “ODO” and the tripmeter modes
“TRIP 1” and “TRIP 2” in the following
order:
ODO → TRIP 1 → TRIP 2 → ODO
NOTE:When selecting “TRIP 1” or “TRIP 2”,the display flashes for five seconds.
When approximately 5.5 L (1.45 US
gal) (1.21 Imp.gal) of fuel remains in the
fuel tank, the display will automatically
change to the fuel reserve tripmeter
mode “F-TRIP” and start counting thedistance traveled from that point. In that
case, pushing the “SELECT” button
switches the display between the vari-
ous tripmeter and odometer modes in
the following order:
F-TRIP → TRIP 1 → TRIP 2 → ODO →
F-TRIP
To reset a tripmeter, select it by push-
ing the “SELECT” button, and then
push the “SELECT” button for at least
one second while the display is flash-
ing. If you do not reset the fuel reserve
tripmeter manually, it will reset itself au-
tomatically and the display will return to
the prior mode after refueling and trav-
eling 5 km (3 mi).1. Odometer/tripmeter/fuel reserve tripmeter
2.“SELECT” button
3.“RESET” button
U2D2EAE0.book Page 8 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-10
3
CAUTION:
ECA10020
Do not operate the engine if it isoverheated.
Transmission gear display
This display shows the selected gear.
The neutral position, however, is not
displayed, it is indicated by the neutral
indicator light.
To avoid damaging the YCC-S clutch,
the display flashes when it is necessary
to downshift. If this occurs, downshift
until the display stops flashing.Ambient temperature, instanta-
neous fuel consumption and aver-
age fuel consumption modes
(except for the UK)
Push the “RESET” button to switch the
display between the ambient tempera-
ture mode and the fuel consumption
modes in the following order:
Air → km/L or L/100 km → AV_ _._
km/L or AV_ _._ L/100 km → AirAmbient temperature mode
This display shows the ambient tem-
perature from –9 °C to 50 °C in 1 °C in-
crements. The temperature displayed
may vary from the ambient tempera-
ture.NOTE:

If the ambient temperature falls be-
low –9 °C, a lower temperature
than –9 °C will not be displayed.


If the ambient temperature climbs
above 50 °C, a higher temperature
than 50 °C will not be displayed.
1. Transmission gear display
2. Neutral indicator light “”
1. Ambient temperature/instantaneous fuel
consumption/average fuel consumption
2.“SELECT” button
3.“RESET” button
1. Ambient temperature
U2D2EAE0.book Page 10 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-17
3
EAU40492
Shift pedal This vehicle is equipped with a con-
stant-mesh 5-speed transmission. The
shift pedal is located on the left side of
the engine. Neutral is at the bottom po-
sition.NOTE:It is impossible to shift gears unless themain switch is in the “ON” position.
The shift pedal can be adjusted to three
positions to suit the rider’s preference.
To adjust the shift pedal position
1. Remove the shift pedal by remov-
ing the bolt.2. Move the shift pedal to the desired
position.
3. Install the bolt, and then tighten it
to the specified torque.
EAU40481
Hand shift lever “”/“” The hand shift lever must be enabled
by pressing the hand shift control
switch prior to shifting gears.
Pull the “” side of the lever with your
index finger to shift up, and push the
“” side of the lever with your thumb to
shift down.
1. Shift pedal
1. Shift pedal
2. Bolt
3. Standard position
Tightening torque:
Shift pedal bolt:
6.5 Nm (0.7 m·kgf, 5.0 ft·lbf)
1. Hand shift lever “”
2. Hand shift lever “”
3. Hand shift control switch
U2D2EAE0.book Page 17 Monday, June 26, 2006 2:55 PM

INSTRUMENT AND CONTROL FUNCTIONS
3-33
3
With the engine turned off:
1. Move the sidestand down.
2. Make sure that the engine stop switch is turned on.
3. Turn the key on.
4. Shift the transmission into the neutral position.
5. Keep the front or rear brake applied.
6. Push the start switch.
Does the engine start?
With the engine still running:
7. Move the sidestand up.
8. Keep the front or rear brake applied.
9. Shift the transmission into gear.
10. Move the sidestand down.
Does the engine stall?
After the engine has stalled:
11. Move the sidestand up.
12. Release the brake.
13. Push the start switch.
Does the engine start?
The system is OK. The vehicle can be ridden.
This check is most reliable if performed with
a warmed-up engine.The neutral, the brake switch or the YCC-S
system may be defective.
The vehicle should not be ridden until
checked by a Yamaha dealer.
The sidestand switch may be defective.
The vehicle should not be ridden until
checked by a Yamaha dealer.
A brake switch may be defective.
The vehicle should not be ridden until
checked by a Yamaha dealer.
NO YES YES NO YES NONOTE:
U2D2EAE0.book Page 33 Monday, June 26, 2006 2:55 PM

OPERATION AND IMPORTANT RIDING POINTS
5-1
5
EAU15950
WARNING
EWA10270


Become thoroughly familiar
with all operating controls and
their functions before riding.
Consult a Yamaha dealer re-
garding any control or function
that you do not thoroughly un-
derstand.


Never start the engine or oper-
ate it in a closed area for any
length of time. Exhaust fumes
are poisonous, and inhaling
them can cause loss of con-
sciousness and death within a
short time. Always make sure
that there is adequate ventila-
tion.


Before starting out, make sure
that the sidestand is up. If the
sidestand is not raised com-
pletely, it could contact the
ground and distract the opera-
tor, resulting in a possible lossof control.
EAU40331
Starting the engine In order for the ignition circuit cut-off
system to enable starting, one of the
following conditions must be met:

The front or rear brake is applied
with the transmission in the neutral
position whether the sidestand is
up or down.


The front or rear brake is applied
with the transmission in gear and
the sidestand is up.WARNING
EWA14540


Before starting the engine,
check the function of the igni-
tion circuit cut-off system ac-
cording to the procedure
described on page 3-32.


Always apply the front or rear
brake while the main switch is in
the “ON” position and the trans-
mission is in gear, otherwise the
rear wheel will move freely.


Never ride with the sidestanddown.
1. Turn the key to “ON” and make
sure that the engine stop switch is
set to “”.
CAUTION:
ECA15510
The following warning lights and in-
dicator light and indicators should
come on for a few seconds, then go
off.

Oil level warning light


Engine trouble/YCC-S indica-
tors and warning light


Immobilizer system indicator
light


ABS warning light
If a warning or indicator light, or an
indicator does not go off, see page
3-4 for the corresponding circuit
check.
2. Shift the transmission into the neu-
tral position with the front or rear
brake applied.NOTE:When the transmission is in the neutral
position, the neutral indicator light
should be on, otherwise have a
Yamaha dealer check the electrical cir-cuit.
3. Start the engine by pushing the
start switch.
U2D2EAE0.book Page 1 Monday, June 26, 2006 2:55 PM