1999 HONDA CIVIC Counter shaft

Timing Belt
lnstallation (cont'dl
3. Install the timing belt tightly in the sequence shown.
@ Timing belt drive pulley (crankshaft) + @Adjusting pulley * @ Water pump pu ey + @ Intakecamshaft pulley + @ Exhaust camshaft pulley,
NOTE: Make sure the timing belt drive pulley andcamshaft pullevs are at TDC,
Loosen and retighten the adjusting bolt to tensionthe timing belt.
Install the lower cover and middle cover.
NOTE: Clean the middle and lower covers beforeinstalling.
Install the crankshaft pulley, then tighten the pulleybolt (see page 459).
Rotate the crankshaft pulley about five or six turnscounterclockwise so that the timing belt positions onthe pulleys.
Adjust the timing belt tension (see page A611.
7.
6-64
a
9. Check that the crankshaft pulley and camshaft pul-leys are both at TDC.
CRANKSHAFT PULLEY
CAMSHAFT PULLEY:
lf the camshaft and crankshaft pulleys are not posi-tioned at TDC, remove the timing belt, adjust theposition following the procedure on page &63, thenreinstall the timing belt.
After installation, adjust the tension of each belt.
. See section 23 for alternator belt tension adjust-ment.
. See section 22lor NC compressor belt tensionadiustment,
. See section 17 for P/S pump belt tension adjust-ment.
'l
10.
11.
I
"UP" MARKS

Main Bearings
4.
Glearance
1.To check main bearing-to-journal oil clearance.
remove the main caps and bearing halves.
Clean each main journal and bearing half with a
clean shop towel.
Place one strip of plastigage across each main jour-
na l.
NOTE: lf the engine is still in the car when you bolt
the main cap down to check clearance, the weight
of the crankshaft and flvwheel will flaften the plasti-
gage further than just the torque on the cap bolt.
and give you an incorrect reading. For an accurate
reading, support the crank with a jack under the
counterweights and check only one bearing at a
time,
Reinstall the bearings and caps, then torque the
bolts.
lst step: 25 N'm (2.5 kgl'm. 18 lbf'ft)
FinalsteD:
B16A2 engine:
76 N.m (7.8 kgf.m, 56 lbf'ft)
D16Y5, Dl6Y7, D16Y8 engines:
51 N.m (5.2 kgf'm, 38 lbf'ft)
NOTE: Do not rotate the crankshaft during inspec-
tron.
Remove the cap and bearing again, and measure the
widest part ot the plastigage.
Main Boaring-toJournal Oil Clearance:
816A2 engine:
Standald {New}:
No. l, 2, 4, 5 Journals:
O.O2,l - 0.042 mm 10'00(B - 0.0017 in)
No. 3 Journals:
0.030 - 0.048 mm {0'0012 - 0'0019 in)
Servico Limit: 0.06 mm {0.002 in,
Dl6Y5, Dl6
r, Dl6Y8 engines:
Standard (Nsw):
No. 1,5 Journals:
0.018 - 0.035 mm {0.0007 - 0'001'[ in)
No. 2. 3, 4 Journals:
0.02,1 - 0.0,(2 mm {0'0009 - 0.0017 in}
Service Limit: 0.05 mm (0.002 in)
\
7-9
7.
lf the plastigage measures too wide or too narrow,
(remove the engine if it's still in the car), remove the
crankshaft, and remove the upper half of the bear-
ing. Install a new. complete bearing with the same
color code {select the color as shown on the next
page), and rechsck the clearance.
CAUTION: Do nol fil€, shim, or scrape the bearings
or tho cap3 to adiust cleatanc€.
lf the plastigage shows the clearance is still incor-
rect, try the next larger or smaller bearing (the color
listed above or below that one), and check again
NOTE: lf the proper clearance cannot be obtained
by using the appropriate larger or smaller bearings,
replace the crankshaft and start over.

PCM CONNECTOR B {25P)
Wire side of {emale terminals
CONNECTOR B (25P)',
*1i USA model*2: A/T (D16Y7, Dl6Yg engine)*3: CVT (D16Y5 engine)*4: M and Dl6Y7 engane*5: Except A.rT and 016Y7 engine*6: A,/T (D16Y8 engine)*7r CVT (D16Y5 engine) and D16Y8 engine*8: '96 D16Y8 engine (coupe),'97 D16Y8
models, sedan: KL model),'98 Dt6Y5
engine,'99 00 Dl6Y5 1M/Ti engine
*9: D16Y5 engine*10: M/T (D16Y5 engine)*11: Except M/T {D16YS engine}*12i D16Y5, D16Y8 engine* 13: D16Y8 engine*14: D16Y7 engine*15: '97 Dl6YTengine (coupe: KL model, sedan: KL (LX) model)''98D16Y7 engine (cont,d)engine (coupe: allengine,'98 D16Y8
FCMNOTE: Standard battery voltage is 12 v'
erminalTnumoer
Wirecotol
TerminalnameDescriptionSignal
1LS_ (LINEAR SOLENOID
VALVE - SIDE)
Ground for linear solenoid valveWii-ignnion switctr oN {ll}: pulses
2REDLS+ (LINEAR SOLENOIDVALVE + SIDE)
-Drii6l linear solenoid valveWith ignilion switch uN (lll: pulses
3BLU/YEL
SHA {SHIFT CONTROLSOLENOID VALVE A)
-Drives shift control solenoid valve AWith engine running in 2nd,3rd gears:
battery voltageWith engine running in 1st,4th gears:
about 0 V
4GRN/BLKLC B (LOCK'UP CONTROL
SOLENOID VALVE B}Drives lock up control solenoid
valve B.
With lock-up ONI battery voltage
With lock-up OFF:0 v
5YELLC A (LOCK.UP CONTROLSOLENOID VALVE A)Drives lock up controlsolenoidWith lock-uP ON: baftery voltage
With lock-up OFFi 0 V
8PNKATPD3 (NT GEAR POSI.
TION SWITCHi
Detects Py'T gear Position switch
signal.
In [D31 position: 0 V
ln ;y other position: battery voltage
1lGRN^lr'HT
SHB (SHIFT CONTROLSOLENOID VALVE B)DnGs shift conttol solenoid valve BWith engine running in 1st,2nd: battery
vo|taqeWith;ngine running in 3rd,4th: about 0 V
12WHT/REDSLU (INTERLOCK CON
TBOL UNIT)
-DlivEilite'lock control,rnit.With ignition switch ON (ll) and brake
pedal depressed: 0 V
13GRN/BLK
D4 IND (D4 INDICATORLIGHT)
Drives D4 indicator light.With Pll indicator lrght turneo urr: oarterv
voltaoeWith ld indicator light turned OFF: 0 v
14WHTNMSG {MAINSHAFTSPEED SENSOR GROUND)
GZiiI'for mainshaft speed sensol
With engine running: Pulses
In E position: 0VIn any other position: battery voltage
REDNM {MAINSHAFT SPEED
SENSOR)
Detects mainshaft speed sensor
srgnal.
ATPR {M GEAR POSI
TION SWITCH)
Detects M gear Position switch
signal
't1BLUATP2 {A/T GEAR POSITION SWITCH)
Detects A/T gear Position switch
signal.
In E position: 0VIn any other position: battery voltage
22GRNNCSG (COUNTERSHAFT
SPEED SENSOR GROUND)Ground for countershaft speed
sensor.
23BLUNC (COUNTERSHAFT
SPEED SENSOR)
Detects countershaft speed sensor
signal.
Vvith ignition switch ON (ll), and front
wheels rotating: Pulses
24YELATPD4 {M GEAF POSI-
TION SWITCH)
Detects M gear Position switch
signal.
ln E position:0 VIn any other position: 5 V
25LT GRNATPNP (A"/T GEAR POSITION SWITCH)
Detects A/T gear Position switch
srgnal,
In E orE position:0 V
In any other position: battery voltage
!a
11-89

ECM/PCM CONNECTOR O {16P)
Wire side ol temale terminalsECM/PCM CONNECTOR D {16P)
(D16Y7, D16Y8 enginelNOTE: Standard battery voltage is 12 V.
L
.1 A/J (Dl6Y7, Dr6Y8 engine)
(cont'd)
1 1-95
5i!ml
YELLCA (LOCK.UPCON]ROLSOLENOID VALVE A)Orivos look-up controlsol€noid wlv€ a.With lock-up ON: httery vollageWith lock-up OFFi 0 V
GRN,M/HT
SHB {SHIFT CONTFOLSOLENOIO VALVE B)Drivos sh ift cont.ol solanoid valv6 Bln E posnion, in 1st lnd 2nd eoat ,n E E pos'tion:Battsry voltagoInElposirion. in 3rd seat in pd, El in.th sear in
l_d polition: o v
3''GRN/BLKLC8 (IOCK UP CONTBOLSOLENOID VALVE B)Drivs locl up conttol sol€noid v6lv€ Bwhen fulllock-up: Banory vollagaWnh naf locl-uP: Pulsing si9n6l
5',BLK/YELVSSOI (BATTEsYVOLTAGEFOB SOLENOID VALVE)Powe. sourc€ ol solGnoid valvewirh ignirion sitch ON (ll): battory voltaoeWirh ignnion switch OFF:0 v
ATPR (AT GEAR POSITIONswrTcH)Detecrs Ay'T g6a. position switch signal.In any olh€r position: APProx. 10 V
8LU/YEL
SHA iSHIFI CONTROLSOLENOIDVALVE A)Oriv€6 sh ift conirol sol€noid valve A.ln tr,tr position, in 2nd €nd 3rd sear in lpd, &lposirion: Batt€ry vollsgo;n 1d soar in E, E position, in.ih se6r in E
PNKATPO3 (AT GEAR POSITIONSWITCH)Oot6cts Ay'T S6.r poeirioo switch siSnalIn Enyoth.r position: APPror, t0 v
9''YELATPD4 {AT GEAE POSITIONswrTcH)Oorocts A/I gs8r position switch signal.In any oth6t position:APProx 5 V
BIUNC (COUNTE RSHAFT SPEEDSENSOB)DetocB counr€.shaft sp66d $osr sig.alsD€p€nding on v6hicls 8pe€d;Pul.ins signalWh6n v€hicls i5 ltoPPsd:0 v
REONM (MAINSHAFTSPEED SEN.soR)O€l€cts mainshalt sp€€d 3.nsor 3ign.lsWi$ engino rLrnningl PUls6s
NMSG {MAINSHAFT SPEEOSENSOR GFOUNO)Groundfo, mainshaft sp@d sensor.
13''!T GFNATPNP {AT GEAF POSITIONswrrcH)oetscts A/T 96ar pGitaon swhch signalIn par* or n6ulral:0 VIn sny olhd po3ition: APProx l0V
BLUATPz {AT GEAE POSITIONswrTcHlDor€cis !y'T gos. posilion swilch signal.In any oth6r Position: APProx, 10 V
16''GANNCSG {COUNTEBSHAFT SPEEDSENSOE GROUND)Ground lor countershaii sp€3d s6nsor.
r lo

PGM-FI System
System Description
CKP/TDC/CYP Sensor
MAP Sensor
IAT SensorTP SensorEGR Valve Lift Sensor*'Primary H02SSecondary HO2SVSSBARO SensorELD*'KS€Starter SignalALT FR SignalAir Conditioning SignalA/T Gear Position SignalBattery Voltage {lGN.1}Erake Switch SignalPSP Switch SignalFuel Tank Pressure Sensor*iVTEC Pressure Switch*5Clutch Switch Signal*6Countershaft Speed SensornBMainshaft Speed Sensorrs
-\
----t /
F;ilrr j"-----fi-tri-'r.;l
Fb"t."'i" d" c;;il
F,h"'c;;tr*".io";-l
@."r.l"sc;;ll
EaM/PcM B""k-p F"""till
r\
-:/
Fuel IniectorsPGM-Fl Main Belay {Fuel Pump)MILIAC Valve!y'C Compressor Clutch RelayRadiator Fan Relay*,Condenser Fan RelayALT*'lcMEVAP Purge Control Solenoid
Primary HO2S HeaterSecondary H02S HeaterEGR Control Solenoid Valve*rEGR valve*6EVAP Bypass Solenoid Valve*'EVAP Control Canister Vent Shut
VTEC Solenoid Valve*5DLCLock-up Control Solenoid Valve*aShift Control Solenoid Valve*3Linear Solenoid Valve*3
*1: Dl6Y5 engine*2: USA model*3: CW (D16Y5 ensine), D16Y8 engine and 81642 ensine*4: '96 D16Y8 engine lcoupe),'97 Dl6Y7 engine (coupe: KL model, sedan: KL (LX) model),'97 D16Y8 engine {coupe: all models, sedan: KLmodel),'98-all models,'99'all models,'00-all models+5: D16Y5, D16Y8,816A2 engine*6: M/T (D16Y5 enginei*7: CVT 1D'l6Y5 engine)+8: A/T (D16Y7, D16Y8 engine)*9: '96 D16Y5 engine,'96 D16Y7 engine,'96 Dl6Y8 engine (sedan),'97 D16Y5 engine,'97 Dl6Y7 engine (coupe: KA, KC models, sedan:KA, KC, KL (LX) models, hatchback: all models),'97 D16Y8 engine (sedan: KA, KC modelsi
PGM-FI Sy3lem
The PGM-Fl system on this model is a sequential multipon fuel injection system.
Fuel iniector Timing and Duration
The ECM/PCM contains memories for the basic discharge durations at various engine speeds and manifold air flow rates.
The basic discharge duration, after being read out from the memory. is further modified by signals sent from various sen-
sors to obtain the final discharge duration.
ldle Air Control
ldle Air Control Valve llAC Valve)
When the engine is cold. the A,/C compressor is on, the transmission is in gear, the brake pedal is depressed, the P/S load
is high, or the alternator is charging, the ECM/PCM controls current to the IAC Valve to maintain the correct idle speed.
lgnition Timing Control
. The ECM/PCM contains memories for basic ignition timing at various engine speeds and manifold air flow rates.
lgnition timing is also adjusted for engine coolant temperature.
. Aknockcontrol system was adopted which sets the ideal ignition timing for the octane rating ofthegasoline used.*3
Othgr Control Funqtions
1. Starting Control
When the engine is started, the ECM/PCM provides a rich mixture by increasing fuel injector duration.
2. Fuel Pump Control
. When the ignition switch is initially turned on, the ECM/PCM supplies ground to the PGM-Fl main relay that sup-plies current to the fuel pump for two seconds to pressurize the fuel system.. When the engine is running, the ECI\4PCM supplies ground to the PGM-FI majn relay that supplies current to the fuel
oumo.
. When the engine is not running and the ignition is on, the ECM/PCM cuts ground to the PGM-FI main relay which
cuts current to the fuel pump.
11-104
INPUTS
ENGINE CONTROL MODULE (ECMY
POWERTRAIN CONTROL MODULE (PCM) OUTPUTS

\
S40 Model (All except'99 - 00 2-door Si' SiR)
Manual Transmission
Special Tools ..'.......... 13-2
Maintenance
Transmission Oil .............................. 13-3
Back-up Light Switch
Replacement ......... 13-3
Troubleshooting '....... 13-4
Transmission AssemblY
Removal ................. 13-5
lnstallation ............. 13-8
lllustrated Index ...............'........."........ 13-10
Transmission Housing
I Removaf .."""""""' 13-12
J R"rr"r"" Shift Holder
Clearance lnspection ....................... 13-13
Reverse ldler Gear
Removal ....'.........." 13-14
Mainshaft, Countershaft, Shift Fork
Disassembly ......'... 13-14
Mainshaft AcsemblY
Index ............... ....... 13-15
Clearance Inspection ..'.................... 13-16
Disassembly .......... 13-17
Inspection ....'......... 13-18
Reassembly ........... 13-19
Countershaft AssemblY
lndex ................ ...... 13-20
Clearance lnspection ."..........'......." 13-21
Disassembly ..."""' 13-22
Inspection .............. 13-23
Reassembly ..'.""... 13-23
Shift Fork AssemblY
lndex ............... ."'... 13-25
Clearance lnspection ."......."........'.. 13'26
MBS Shift Piece Inspection ....-.....'.. 13'27
Synchro Sleeve, Synchro Hub
f nspection/lnstallation .......'...... ".... 13'27
Synchro Ring, Gear
Inspection '....'..".... 13'28
Shift Rod
Removal .'......".""" 13'29
Differential
lndex ......."'...... .'."' 13-30
Backlash Inspection ..........."......."... 13-30
Bearing Beplacement'.............'.".... 13'31
Final Driven Gear Replacement '..... 13-31
Thrust Shim Adiustment ..."........... 13-32
Clutch Housing Bearing
Replacement .......'. 13-34
Mainshaft Thrust Shim
Adiustment '....'..".. 13-36
Transmission
Reassembly ........... 13-39
Oil Seals
Replacement ......... 13-43
Gearshift Mechanism
Overhaul ................ 13-44
\

Torque Value
A - 15 N.m (1.5 kgf.m, 1'1 lbf.ft)
B - 27 N.m (2.8 kgf.m. 20 lbift)
C - 31 N.m {3.2 kgnm, 23 lbift)
\
O BALL BEARING (*T)
ANGULAR
BALL BEARING {*2I
O 5TH SYNCHRO HUB
O 5TH SYNCHRO SLEEVE
€) SYNCHRO SPRING
o SYNCHRO B|NG
@ 5TH GEAR
@ gz xgt x 23.5 mm
NEEDLE BEARING
@ SPACER COLLAR
@34x39x23mm
NEEDLE BEARING
(D 4TH GEAR
O SYNCHRO RING
C) SYNCHRO SPRING
CO 3RD/4TH SYNCHRO SLEEVE
@ 3RD/4TH SYNCHRO HUB
(} 3RD GEAR
@34x39x27.5mmNEEDLE BEARING
G) MAINSHAFT
G) WASHER
@ SPRING WASHER
@ BALL BEARING
Check for wear and
operation.(E 26x42x7 mm OIL SEAL
Replace.
@ 28 mm PLUG BOLT
5,1 N.m {5.5 kgf'm, /t0 lbt'ft)
@ lsT/zND SELECT SPRING
L. 36.26 mm (1./P8 in)
@ SHIFT ARM SHAFT
@ CLUTCH HOUSING
@ INTEELOCK GUIDE BOLT
39 N.m (4.0 kgf.m, 29 lbf.ftl
@ REVERSE SHIFT HOLDER
@ REVERSE IDLER GEAR
@ REVERSE IDLER GEAR SHAFT
@ 5 x 22 mm SPRING PIN
Replace.
@ 3RD/4TH SHIFT PIECE
@ 5TH/REVERSE SHIFT PIECE
@ MBS SHIFT PIECE
@ 1ST/2ND SHIFI FORK
*1:D16Y7 engine*2: D16Y5, D16Y8 engines
@ 3RD//|TH SHIFT FORK
@ 5TH/REVERSE SHIFT FORK
@ 52 mm SNAP RING
@ 65 mm THRUST SHIM (*11
70 mm THRUST SHIM (*21
Selection, page 13-36
@ OIL GUIDE PLATE
@ wASHER Replace.
@ BACK.UP LIGHT SWITCH
25 N.m (2.5 kgf'm, 18 lbf'ft)
@ sET SCREW
22 N.m {2.2 kgf.m, 16 lbl.ft}
@ WASHER Replace.
@D SPRING 1.31.6 mm (1.2,1inl
@ STEEL BALL 15/16 in)
@ BACK-UP LIGHT
SWITCH HARNESS BRACKET
@ TRANSMISSION HANGER
@ 32 MM SEALING BOLT
25 N.m (2.5 kgf.m, 18 lbt'ft)
@ OIL SEAL
Replace.
@ OIL DRAIN PLUG
39 N.m (4.0 kgf.m, 29 lbf.ft)
@ WASHER Replace.
@} OIL FILLER PLUG
44 N.m (4.5 kgf.m, 33 lbf'ftl
@ WASHER Replace.
@) TRANSMISSION HOUSING
€) CLUTCH LINE BRACKET
@ OIL GUTTER PLATE
@ REVERSE LOCK CAM
@ REVEBSE SELECT SPRING
L. 63.4 mm {2.,196 in)
@ REVERSE SELECT RETAINER
@ SHIFT ARM C
@ SHIFT ARM B
@ INTERLoCK
@ COLLAR
@ SHIFT ARM A
@ SPRING WASHER
@ MAGNET
@ sET BALL SPRING BOLT
22 N.m (2.2 kgf.m, 16 lbf.ftl
@ 14 x 20 mm DOWEL PIN
@ 72 mm THRUST SHIM l*11
80 mm THRUST SHIM (*21
Selection, page '13-33
@ DIFFERENTIAL ASSEMBLY
See page 13-30
@ 14 x 25 x 17.5 mm OIL SEAL
Replace.
@ 35 x 56 x 8 mm OIL SEAL
Replace.
@ SHIFT ROD
@ BOOr
@ OIL GUIDE PLATE
@30x47x21 mm
NEEDLE BEARING (* 1}
30x55x21 mm
NEEDLE BEARING {'2)
@ COUNTERSHAFT
@36x41 x 25.5 mm
NEEDLE BEARING
Check for wear and
operatron.
@ lsT GEAR
@ FRICTION DAMPER
@ SYNCHRO RING
@ SYNCHRO SPRTNG
@ lST/2ND SYNCHRO HUB
@ REVERSE GEAR
@ SYNCHRO SPRING
@ SYNCHRO RING
@ FRICTION DAMPER
@ SPACER
@39x4lx27mm
NEEDLE BEARING
@ 2ND GEAR
@ 3RD GEAR
@ 4TH GEAR
@ sTH GEAR
@) BALL BEARING {* 1}
NEEDLE BEARING (*2}
@ BALL BEARING
@) SPRING WASHER
@ LoCKNUT Replace.
108 - 0- 108 N.m
ftt.o* o- 1r.o kst.m,l
179.6- 0- 79.6 rbtft I

13-1 1

Transmission Housing
Removal
NOTE: Place the clutch housing on two pieces of wood
thick enough to keep the mainshaft from hitting the
workbench.
1. Remove the back-up light switch.
2. Remove transmission hanger.
TRANSMISSIONHANGER
BACK-UP LIGHT SWITCH
Remove the setting screws. washers. springs, and
steel balls.
STEEL BALLSO. 5/16 in
SPRINGL. 31.6 mm I 1.24 inl
13-12
SETTING SCREW
TRANSMISSION HOUSING
6.
4.Loosen the transmission housing attaching bolts in
a crisscross pattern in several steps, then remove
them.
Remove the 32 mm sealing bolt.
Expand the snap ring on the countershaft ball bear-
ing, and remove it from the groove using a pair of
snap ring pliers.
32 mm SEALING EOLT
Separate the transmission housing from the clutch
housing, and wipe it clean of the sealant.
Remove the thrust shim, oil guide plate. and oil gut-
ter plate from the transmission housing.
(o
7.
otLGUTTERTE
SNAP RING